BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D10LP1|AL428902
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1710 0.0
>3x_Contig1800
Length = 38778
Score = 1710 bits (862), Expect = 0.0
Identities = 871/875 (99%)
Strand = Plus / Minus
Query: 1 gatcatgccaatacttgcctgagtncccgactttttgcccacccttttgccttctgtcta 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 10563 gatcatgccaatacttgcctgagtgcccgactttttgcccacccttttgccttctgtcta 10504
Query: 61 tccttcaaaacccacctgttttccagccgtatcttcgctcgcatctacacatactgtgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10503 tccttcaaaacccacctgttttccagccgtatcttcgctcgcatctacacatactgtgcc 10444
Query: 121 atatcttgtgtgtagccggacgtgactatgaccaaaaacaaacaaggagaactgttcgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10443 atatcttgtgtgtagccggacgtgactatgaccaaaaacaaacaaggagaactgttcgcc 10384
Query: 181 gatttgtaacactcctgcatccatccaagtgggtatgcgctatgcaatgttaagctaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10383 gatttgtaacactcctgcatccatccaagtgggtatgcgctatgcaatgttaagctaggt 10324
Query: 241 caggtcagaccaggtccaaggacagcaacttgactgtttgcmacctttaccatctttgca 300
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 10323 caggtcagaccaggtccaaggacagcaacttgactgtatgcaacctttaccatctttgca 10264
Query: 301 cagaacatacttgtagctagctagttacacttatggaccgaaaaggcaccccaccatgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10263 cagaacatacttgtagctagctagttacacttatggaccgaaaaggcaccccaccatgtc 10204
Query: 361 tgtccggctttagagtacggccgcagaccgctgatttgccttgccaagcagtagtcacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10203 tgtccggctttagagtacggccgcagaccgctgatttgccttgccaagcagtagtcacaa 10144
Query: 421 tgcatcgcatgagcccacgggcacgggcacgggcacaggaaccattggcaaaaataccag 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10143 tgcatcgcatgagcacacgggcacgggcacgggcacaggaaccattggcaaaaataccag 10084
Query: 481 atacactataccgacgtatatcaagcccaagtttaaaattcctaaatttccgcggggatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10083 atacactataccgacgtatatcaagcccaagtttaaaattcctaaatttccgcggggatc 10024
Query: 541 gactcataaaatagtaaccttctaatgcgtatctattgactaccaaccattagtgtggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10023 gactcataaaatagtaaccttctaatgcgtatctattgactaccaaccattagtgtggtt 9964
Query: 601 gcagaaggcggaattctcccttcttcgaattcagcttgctttttcattttttattttcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9963 gcagaaggcggaattctcccttcttcgaattcagcttgctttttcattttttattttcca 9904
Query: 661 tttttcagtttttgtttgtgtcgaatttagccagttgcttctccaagatgaaaaaaaccc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9903 tttttcagtttttgtttgtgtcgaatttagccagttgcttctccaagatgaaaaaaaccc 9844
Query: 721 ctgcgcagtttctgtgctgcaagatcctaatcgacttttccaccccccacaaaagtaaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9843 ctgcgcagtttctgtgctgcaagatcctaatcgacttttccaccccccacaaaagtaaat 9784
Query: 781 gttcttttgttacattcgcgtgggtagctagctccccgaatcttcaaaggacttagggac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9783 gttcttttgttacattcgcgtgggtagctagctccccgaatcttcaaaggacttagggac 9724
Query: 841 tgcactacatcagagtgtgttcacctggtttgctg 875
|||||||||||||||||||||||||||||||||||
Sbjct: 9723 tgcactacatcagagtgtgttcacctggtttgctg 9689
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5426
Number of Sequences: 1807
Number of extensions: 5426
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)